| MirGeneDB ID | Mdo-Mir-7247 |
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| Family name |
MIR-7247 (all species) |
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| Species |
Gray short-tailed opossum (Monodelphis domestica) |
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| MiRBase ID |
mdo-mir-7247
|
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| Paralogues |
|
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| Orthologues |
Sha-Mir-7247
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| Node of Origin (locus) |
Marsupialia
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| Node of Origin (family) |
Marsupialia
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Genome context
(monDom5_add) |
1: 11130354-11130410 [+]
UCSC
Ensembl
|
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| Seed |
CGCGACA |
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Precursor
(pre-Mir +30nt flank) |
ACUCUGCAGAUGUAAAUACCAAACACGGGGUGGGAGAACGUGUGUGGGGGAAUUCCGAAGUGGUUUCGCGACAUGCGGUCUCUCAUGGCGUGUCUGGGAUUUACAGCUGACGAGGAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACUCUGCAGAUGUAAAUA-- A GG A -|G AAUUCC
CCA ACACG GUGGGAGA CGUGUGU G GGG G
GGU UGUGC UACUCUCU GCGUACA C CUU A
GAGGAGCAGUCGACAUUUAG C GG G G^G UGGUGA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Mdo-Mir-7247_5p* (predicted) |
| mirBase accession | MIMAT0028460 |
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| Sequence |
0- UGGGAGAACGUGUGUGGGGGA -21
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7247-5p
|
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| Mature sequence |
Mdo-Mir-7247_3p |
| mirBase accession | MIMAT0028461 |
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| Sequence |
35- UCGCGACAUGCGGUCUCUCAUG -57
Get sequence
|
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| Proposed targets |
TargetScanVert: mdo-miR-7247-3p
|
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