| MirGeneDB ID | Mdo-Mir-7246 |
|---|
| Family name |
MIR-7246 (all species) |
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| Species |
Gray short-tailed opossum (Monodelphis domestica) |
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| MiRBase ID |
mdo-mir-7246
|
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| Paralogues |
|
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| Orthologues |
Neu-Mir-7246
Sha-Mir-7246
|
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| Node of Origin (locus) |
Marsupialia
|
|---|
| Node of Origin (family) |
Marsupialia
|
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Genome context
(monDom5_add) |
1: 704776839-704776899 [-]
UCSC
Ensembl
|
|---|
| Seed |
UGGAAAC |
|---|
Precursor
(pre-Mir +30nt flank) |
AGGUCCUUCACAAUCUAGUCUCACCCUACCUAUCCAACCUUAUUUCCCACUACGUGUAAUAGAAGAGUGAUGGAAACUAAGGUUGGAUAGGUAGAGUAAGACCACAUUUGAAAAUCAGGGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AGGUCCUUCACAAUCUA-- C C - --| UACGUGU
GUCU AC CUACCUAUCCAACCUUA UUUCC CAC A
CAGA UG GAUGGAUAGGUUGGAAU AAAGG GUG A
CGGGACUAAAAGUUUACAC A A C UA^ AGAAGAU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
|---|
| Star sequence |
Mdo-Mir-7246_5p* |
| mirBase accession | MIMAT0028458 |
|---|
| Sequence |
0- UAUCCAACCUUAUUUCCCACU -21
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7246-5p
|
|---|
| Mature sequence |
Mdo-Mir-7246_3p |
| mirBase accession | MIMAT0028459 |
|---|
| Sequence |
39- AUGGAAACUAAGGUUGGAUAGG -61
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: mdo-miR-7246-3p
|
|---|
