MirGeneDB 3.0

MirGeneDB ID

Mdo-Mir-7244

Family name MIR-7244 (all species)
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-7244
Paralogues
Orthologues
Node of Origin (locus) M. domestica
Node of Origin (family) M. domestica
Genome context
(monDom5_add)
1: 553093580-553093636 [-] UCSC Ensembl
Seed AUGGGAA
Precursor
(pre-Mir +30nt flank)
AUGCGAACUAUUUAGAUGAUAUAUUUUAAAUAUGGGAAAAGCAGGUGAAAAUGUGAUAUGUAUUUUUUCACCUGUUCUUCCUAUAUUUAAAAAUGUCAUGAAGCAUCUACAGCUUUA
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Structure
        10           20        30        40        50        
AUGCGAACUAUUUAGAU---|    A               A            UGUGAU 
                    GAUAU UUUUAAAUAUGGGAA AGCAGGUGAAAA      \
                    CUGUA AAAAUUUAUAUCCUU UUGUCCACUUUU      A
AUUUCGACAUCUACGAAGUA^    -               C            UUAUGU 
     110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
- +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-7244_5p

mirBase accessionMIMAT0028454
Sequence
0- UAUGGGAAAAGCAGGUGAAAAU -22
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Proposed targets TargetScanVert: mdo-miR-7244-5p
Star sequence

Mdo-Mir-7244_3p*

mirBase accessionMIMAT0028455
Sequence
35- UUUCACCUGUUCUUCCUAUAUU -57
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Proposed targets TargetScanVert: mdo-miR-7244-3p