MirGeneDB ID | Mdo-Mir-7244 |
Family name |
MIR-7244 (all species) |
Species |
Gray short-tailed opossum (Monodelphis domestica) |
MiRBase ID |
mdo-mir-7244
|
Paralogues |
|
Orthologues |
|
Node of Origin (locus) |
M. domestica
|
Node of Origin (family) |
M. domestica
|
Genome context (monDom5_add) |
1: 553093580-553093636 [-]
UCSC
Ensembl
|
Seed |
AUGGGAA |
Precursor (pre-Mir +30nt flank) |
AUGCGAACUAUUUAGAUGAUAUAUUUUAAAUAUGGGAAAAGCAGGUGAAAAUGUGAUAUGUAUUUUUUCACCUGUUCUUCCUAUAUUUAAAAAUGUCAUGAAGCAUCUACAGCUUUA
Get precursor sequence
|
Structure | 10 20 30 40 50
AUGCGAACUAUUUAGAU---| A A UGUGAU
GAUAU UUUUAAAUAUGGGAA AGCAGGUGAAAA \
CUGUA AAAAUUUAUAUCCUU UUGUCCACUUUU A
AUUUCGACAUCUACGAAGUA^ - C UUAUGU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
Mature sequence |
Mdo-Mir-7244_5p |
mirBase accession | MIMAT0028454 |
Sequence |
0- UAUGGGAAAAGCAGGUGAAAAU -22
Get sequence
|
Proposed targets |
TargetScanVert: mdo-miR-7244-5p
|
Star sequence |
Mdo-Mir-7244_3p* |
mirBase accession | MIMAT0028455 |
Sequence |
35- UUUCACCUGUUCUUCCUAUAUU -57
Get sequence
|
Proposed targets |
TargetScanVert: mdo-miR-7244-3p
|