MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-12468

Family name MIR-12468 (all species)
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-340
Paralogues
Orthologues Neu-Mir-12468  Sha-Mir-12468 
Node of Origin (locus) Marsupialia
Node of Origin (family) Marsupialia
Genome context
(monDom5_add)		 1: 72641020-72641075 [+] UCSC Ensembl
Seed AGUAAUG
Precursor
(pre-Mir +30nt flank)		 
AAAAUGGACGGUGAUCAAGGUGUGACUAUAAAGUAAUGAGAUUGAUUUCUGUGGUAUAGUAAAUGGAAAUCAGUUUCAUUACCUUACAGUCACAUCUAAUCUUCUACAAUGUUGUU
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Structure
        10          20        30        40        50       
AAAAUGGACGGUGAUCA--|         A   A                    GGUA 
                   AGGUGUGACU UAA GUAAUGAGAUUGAUUUCUGU    U
                   UCUACACUGA AUU CAUUACUUUGACUAAAGGUA    A
UUGUUGUAACAUCUUCUAA^         C   C                    AAUG 
    110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-12468_5p
mirBase accessionMIMAT0006143
Sequence 
0- AAGUAAUGAGAUUGAUUUCUGU -22
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Proposed targets TargetScanVert: mdo-miR-340-5p
Star sequence

Mdo-Mir-12468_3p*
mirBase accessionMIMAT0026767
Sequence 
34- GGAAAUCAGUUUCAUUACCUUA -56
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Proposed targets TargetScanVert: mdo-miR-340-3p