MirGeneDB 2.1

MirGeneDB ID

Mal-Novel-6

Family name MAL-NOVEL-6 (all species)
Seed AAGUCUC
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) M. albus
Node of Origin (family) M. albus
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)
KV884864.1: 120127-120191 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACCAGAACAACGUCCAGGUCGAGUGAGGAAUGAUCAAACGAGGGAAAUGGGUUUUAACCACUGGGUACAUCUCAAGUCUCUUGUAUGAUCAUUCCUUGCUCUUUGACCGCAAAGAGUUCUGGUU
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Structure
        10        20          30        40        50        60  
GACCAGAACAACGUCCAGGUC--|  UG           A        AA    UUUUAACCA 
                       GAG  AGGAAUGAUCA ACGAGGGA  UGGG         \
                       CUC  UCCUUACUAGU UGUUCUCU  ACUC         C
UUGGUCUUGAGAAACGCCAGUUU^  GU           A        GA    UACAUGGGU 
   120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Fe Fe In Ma Ma
Star sequence

Mal-Novel-6_5p*

mirBase accessionNone
Sequence
0- AUGAUCAAACGAGGGAAAUGGG -22
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Mature sequence

Mal-Novel-6_3p

mirBase accessionNone
Sequence
43- CAAGUCUCUUGUAUGAUCAUUC -65
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