MirGeneDB 2.1

MirGeneDB ID

Mal-Novel-2

Family name MAL-NOVEL-2 (all species)
Seed UGGUCAG
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) M. albus
Node of Origin (family) M. albus
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)
AONE01054095.1: 383-438 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAUAAAAGCAGCGGAAUUGUAGGAUAGACAACUUUAACCAGUAGACAAAUCUGUAUCCCACAGAUGGUCAGCUGGUUAAAGUUCUGCGUUUGCAUGCGGACCCCGCGGGUUCGCG
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Structure
        10           20         30        40        50        
GGAUAAAAGCAGCGGAAU---      A-|   CA            A   AA    GUAU 
                     UGUAGG  UAGA  ACUUUAACCAGU GAC  AUCU    \
                     ACGUUU  GUCU  UGAAAUUGGUCG CUG  UAGA    C
GCGCUUGGGCGCCCCAGGCGU      GC^   --            A   G-    CACC 
    110       100        90          80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Fe Fe In Ma Ma
Star sequence

Mal-Novel-2_5p*

mirBase accessionNone
Sequence
0- AACUUUAACCAGUAGACAAAUCU -23
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Mature sequence

Mal-Novel-2_3p

mirBase accessionNone
Sequence
34- AUGGUCAGCUGGUUAAAGUUCU -56
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