| MirGeneDB ID | Hvu-Novel-9 |
|---|
| Family name |
HVU-NOVEL-9 (all species) |
|---|
| Species |
Freshwater-polyp (Hydra vulgaris) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
H. vulgaris
|
|---|
| Node of Origin (family) |
H. vulgaris
|
|---|
Genome context
(Hm105_1.0) |
Sc4wPfr_1096: 115465-115515 [-]
|
|---|
| Seed |
AACUUUG |
|---|
Precursor
(pre-Mir +30nt flank) |
UUUGAAGAAUAAUUUUAACAGAAGUGCUAGUAACUUUGAUGAAUUCUUAAUAUGACGUAUUAAGAAUUCAUUUAAGUCACUAGCACUGAAUUCAUCAAAGUCACUACACAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUUGAAGAAUAAUUUUAACAGA--| A U AUG
AGUGCUAGU ACUU GAUGAAUUCUUAAU \
UCACGAUCA UGAA UUACUUAAGAAUUA A
UACACAUCACUGAAACUACUUAAG^ C U UGC
. 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Hvu-Novel-9_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UAACUUUGAUGAAUUCUUAAU -21
Get sequence
|
|---|
| Star sequence |
Hvu-Novel-9_3p* |
| mirBase accession | None |
|---|
| Sequence |
30- UAAGAAUUCAUUUAAGUCACU -51
Get sequence
|
|---|
