| MirGeneDB ID | Hvu-Novel-4 |
|---|
| Family name |
HVU-NOVEL-4 (all species) |
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| Species |
Freshwater-polyp (Hydra vulgaris) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
H. vulgaris
|
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| Node of Origin (family) |
H. vulgaris
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Genome context
(Hm105_1.0) |
Sc4wPfr_262.2: 1237021-1237069 [-]
|
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| Seed |
GAAAAUG |
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Precursor
(pre-Mir +30nt flank) |
UUUGCUAUUUUUAAAUGAUAUAUAAUAUUCUGAAAAUGUUAUCCAAUGAGCCUGAGGCUUGCUGGAUAACAUUUUCAGAACAUUAUAUAUCAUUUGCACUUGUAAAAAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUUGCUAUUUUUAAAUG--| A AU CU
AUAUAUAAU UUCUGAAAAUGUUAUCCA GAGC \
UAUAUAUUA AAGACUUUUACAAUAGGU UUCG G
AAAAAAUGUUCACGUUUAC^ C CG GA
100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Hvu-Novel-4_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGAAAAUGUUAUCCAAUGAGC -21
Get sequence
|
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| Co-mature sequence |
Hvu-Novel-4_3p |
| mirBase accession | None |
|---|
| Sequence |
28- UUGCUGGAUAACAUUUUCAGA -49
Get sequence
|
|---|
