MirGeneDB 2.1

MirGeneDB ID

Hvu-Novel-14

Family name HVU-NOVEL-14 (all species)
Seed AUGUUGA
Species Freshwater-polyp (Hydra vulgaris)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) H. vulgaris
Node of Origin (family) H. vulgaris
Genome context
(Hm105_1.0)
Sc4wPfr_1761: 52941-52992 [-]
Precursor
(pre-Mir +30nt flank)
UACUGUAGUUUAAAUACAUUUAUAUUAGUCAAUGUUGACGGUGAUUAUCAUGGUAUAACCAUGAUAAUUAUCCCAACAUUGACUAAUUUUUGAAACAAUCAAUAAUGCCAAG
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Structure
        10        20          30        40        50      
UACUGUAGUUUAAAUACAUUUAU--|             AC             GUA 
                         AUUAGUCAAUGUUG  GGUGAUUAUCAUG   \
                         UAAUCAGUUACAAC  CUAUUAAUAGUAC   U
GAACCGUAAUAACUAACAAAGUUUU^             C-             CAA 
110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
1_ 2_ 3_ 3_ Un
Mature sequence

Hvu-Novel-14_5p

mirBase accessionNone
Sequence
0- AAUGUUGACGGUGAUUAUCAUG -22
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Star sequence

Hvu-Novel-14_3p*

mirBase accessionNone
Sequence
31- UGAUAAUUAUCCCAACAUUGA -52
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