| MirGeneDB ID | Hvu-Mir-3011 |
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| Family name |
MIR-3011 (all species) |
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| Species |
Freshwater-polyp (Hydra vulgaris) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
H. vulgaris
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| Node of Origin (family) |
H. vulgaris
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Genome context
(Hm105_1.0) |
Sc4wPfr_481: 321826-321879 [-]
|
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| Seed |
UGAUUUU |
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Precursor
(pre-Mir +30nt flank) |
UCUACGAAACUUUUUGUCAUGAUUCUUUCGUAAAUCAUUUUUUGAAUCAGAGGGGAAGUCCUUGAUUUUAUGGAAUGAUUUACGAAAAAAUUGACAAAUCUGCAUCAUCAUUUA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UCUACGAAACUUUUUGUCAU-- C UU-| G GG
GAUU UUUCGUAAAUCAUUUU GAAUCA AGG A
UUAA AAAGCAUUUAGUAAGG UUUAGU UCC A
AUUUACUACUACGUCUAAACAG A UAU^ - UG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Hvu-Mir-3011_5p* |
| mirBase accession | None |
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| Sequence |
0- UAAAUCAUUUUUUGAAUCAGAGG -23
Get sequence
|
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| Mature sequence |
Hvu-Mir-3011_3p |
| mirBase accession | None |
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| Sequence |
31- UUGAUUUUAUGGAAUGAUUUACG -54
Get sequence
|
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