| MirGeneDB ID | Gmo-Mir-7132-P2 |
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| Family name |
MIR-7132 (all species) |
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| Seed |
ACUUGGU |
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| Species |
Cod (Gadus morhua) |
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| MiRBase ID |
gmo-mir-7132a
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| Paralogues |
Gmo-Mir-7132-P1
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| Orthologues |
Mal-Mir-7132-P2
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| Node of Origin (locus) |
Clupeocephala
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| Node of Origin (family) |
Clupeocephala
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Genome context
(Gadus_morhua.gadMor1.dna.toplevel) |
GeneScaffold_3795: 75041-75097 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGUCGCCAAGUCUGGCUGUCUCUUCCCCUGGACUUGGUCAAAGCUCCUCAGUACAGCAACAACUCUGAGGCGUUUGGAACAAGUUCAGGGUUCGGGACCCAAUCUGCCAGGGUUUGG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UGUCGCCAAGUCUGGCU--| UUC G A U UACAGC
GUCUC CCCUGGACUUG UC AAGC CCUCAG \
CAGGG GGGACUUGAAC AG UUUG GGAGUC A
GGUUUGGGACCGUCUAACC^ CUU A G C UCAACA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Gmo-Mir-7132-P2_5p |
| mirBase accession | MIMAT0044250 |
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| Sequence |
0- GACUUGGUCAAAGCUCCUCAGU -22
Get sequence
|
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| Co-mature sequence |
Gmo-Mir-7132-P2_3p |
| mirBase accession | MIMAT0044251 |
|---|
| Sequence |
35- UGAGGCGUUUGGAACAAGUUCA -57
Get sequence
|
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