| MirGeneDB ID | Gmo-Mir-430-o34 |
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| Family name |
MIR-430 (all species) |
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| Seed |
AAGUGCU |
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| Species |
Cod (Gadus morhua) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Hsa-Mir-430-P34
|
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| Node of Origin (locus) |
G. morhua
|
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| Node of Origin (family) |
Vertebrata
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Genome context
(Gadus_morhua.gadMor1.dna.toplevel) |
contig662347: 449-509 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUACUAAGGCAUGCAUUUGUCAAAAGUAUUACCCUAACAGGAGUAUUGACUUGUCUUGUUUUCAUAGAGUAAGUGCUACUUGUUGGGGUAGUUUUACUUGACUUAAACAACCUUAUCUACU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AUACUAAGGCAUGCAUUU- AAGU- -| G UGUCUUG
GUCAA AUUACCCUAACAGG AGUAUU ACU U
CAGUU UGAUGGGGUUGUUC UCGUGA UGA U
UCAUCUAUUCCAACAAAUU CAUUU A^ A GAUACUU
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
|
|
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| Star sequence |
Gmo-Mir-430-o34_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- ACCCUAACAGGAGUAUUGACU -21
Get sequence
|
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| Mature sequence |
Gmo-Mir-430-o34_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UAAGUGCUACUUGUUGGGGUAG -61
Get sequence
|
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