| MirGeneDB ID | Ete-Novel-2 |
|---|
| Family name |
ETE-NOVEL-2 (all species) |
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| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
E. telfairi
|
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| Node of Origin (family) |
E. telfairi
|
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Genome context
(echTel2) |
JH980313: 25968276-25968337 [+]
UCSC
|
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| Seed |
AAAACAC |
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Precursor
(pre-Mir +30nt flank) |
GGCGUGAUUGUGACCUUCUGUCCAACAGAACAAAACACUGUCCGGUCCUGUGCUUACGGCUGUGCGUCCGCAGGACAGGGCAGUGUUUUAUUCUGUUGUCCAUAGUAUCACAAUGAGAGCCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GGCGUGAUUGUGACCUUC--| UC C G CUUACGG
UG CAACAGAA AAAACACUGUCC GUCCUGUG C
AC GUUGUCUU UUUUGUGACGGG CAGGACGC U
ACCGAGAGUAACACUAUGAU^ CU A A CUGCGUG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
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|
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| Mature sequence |
Ete-Novel-2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- CAAAACACUGUCCGGUCCUGUG -22
Get sequence
|
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| Star sequence |
Ete-Novel-2_3p* |
| mirBase accession | None |
|---|
| Sequence |
40- CAGGACAGGGCAGUGUUUUAUU -62
Get sequence
|
|---|
