MirGeneDB 2.1

MirGeneDB ID

Ete-Novel-1

Family name ETE-NOVEL-1 (all species)
Seed AAAAGCG
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) E. telfairi
Node of Origin (family) E. telfairi
Genome context
(echTel2)
JH980293: 67758018-67758077 [+] UCSC
Precursor
(pre-Mir +30nt flank)
UGCAGGCACAGACGUACGCGAGGGGGCUUCUAAAAGCGUGUGGCAAAGCUCAGUUGUCUUGUAAUUCCAGCUUCUCCACACGCUUUUUGAAGCCUGCUCGUCAGUGGCUGCUGUGUUUAG
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Structure
        10          20        30        40        50         
UGCAGGCACAGACGUAC--|    G       U            CA     CAGUUGUC 
                   GCGAG GGGCUUC AAAAGCGUGUGG  AAGCU        U
                   UGCUC UCCGAAG UUUUCGCACACC  UUCGA        U
GAUUUGUGUCGUCGGUGAC^    G       U            UC     CCUUAAUG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Ete-Novel-1_5p

mirBase accessionNone
Sequence
0- UAAAAGCGUGUGGCAAAGCUCA -22
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Star sequence

Ete-Novel-1_3p*

mirBase accessionNone
Sequence
38- AGCUUCUCCACACGCUUUUUGA -60
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