| MirGeneDB ID | Eca-Mir-6119 |
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| Family name |
MIR-6119 (all species) |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-6119
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| Node of Origin (locus) |
Scrotifera
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| Node of Origin (family) |
Scrotifera
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009179.1: 98954634-98954697 [-]
UCSC
Ensembl
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| Seed |
GAGGUAA |
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Precursor
(pre-Mir +30nt flank) |
GCUGUGUUUUCCUAGCCUGGAAUCGUUUUGAGAGGUAAAAAAUUGAUUUGACUAGUUCUUAAACACAUCUAGCAAAUCAUUUUUUACUCUCCAAAAAGAGCUCCAAACUUGAAGGAAGGAAAAA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GCUGUGUUUUCCUAGCC-- A-| G A - U A AGUUCUUA
UGGA UC UUUUG GAG GUAAAAAAU GAUUUG CU \
ACCU AG AAAAC CUC CAUUUUUUA CUAAAC GA A
AAAAAGGAAGGAAGUUCAA CG^ A - U - - UCUACACA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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| Mature sequence |
Eca-Mir-6119_5p |
| mirBase accession | None |
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| Sequence |
0- AGAGGUAAAAAAUUGAUUUGACU -23
Get sequence
|
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| Star sequence |
Eca-Mir-6119_3p* |
| mirBase accession | None |
|---|
| Sequence |
42- CAAAUCAUUUUUUACUCUCCAA -64
Get sequence
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