MirGeneDB 2.1

MirGeneDB ID

Ebu-Novel-1

Family name EBU-NOVEL-1 (all species)
Seed GAUGGAA
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) E. burgeri
Node of Origin (family) E. burgeri
Genome context
(Eburgeri_3)
FYBX02010348.1: 152022-152080 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCGUCUCGUCCAGAUGUCAGAAUACCGUGAAGGUUCGGGUCCAUUCCAUCAGCUCAGUUUUGGUUGUUGAUGGAAAGCUCCGAGUCUCCUCGUUCUCUCUGUCUCUCGUCGAUCAGUUG
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Structure
        10         20         30         40        50         
UCGUCUCGUCCAGAUGU-    AUAC-  UGA  GU    -| CCA          UCAGU 
                  CAGA     CG   AG  UCGG GU   UUCCAUCAGC     U
                  GUCU     GC   UC  AGCC CG   AAGGUAGUUG     U
GUUGACUAGCUGCUCUCU    CUCUU  UCC  UG    U^ A--          UUGGU 
       110       100        90        80          70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Ebu-Novel-1_5p*

mirBase accessionNone
Sequence
0- AGGUUCGGGUCCAUUCCAUCAGC -23
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Mature sequence

Ebu-Novel-1_3p

mirBase accessionNone
Sequence
37- UGAUGGAAAGCUCCGAGUCUCC -59
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