| MirGeneDB ID | Dmo-Novel-16 |
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| Family name |
DMO-NOVEL-16 (all species) |
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| Species |
Fruit fly (Drosophila mojavensis) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
D. mojavensis
|
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| Node of Origin (family) |
D. mojavensis
|
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Genome context
(Dmoj_caf1) |
scaffold_6680: 17729242-17729301 [-]
Ensembl
|
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| Seed |
UGAGCCC |
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Precursor
(pre-Mir +30nt flank) |
UGGGUGCGUGUGUGUGUGUUAUACAUGAAUACGUGUGUAUGUGGGCUUAUGUGUAACAAAAGCGUGGCGUGAGCCCAUUUACAUGUGUGUGCAUGUGUAGCAAUGGCUGCUGGUACCGCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGGGUGCGUGUGUGUGU--| A UG U UGUAACA
GUUAUACAUG AUACG UGUA GUGGGCUUAUG A
CGAUGUGUAC UGUGU ACAU UACCCGAGUGC A
ACGCCAUGGUCGUCGGUAA^ G GU U GGUGCGA
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
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Tissue expression
|
|
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| Star sequence |
Dmo-Novel-16_5p* |
| mirBase accession | None |
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| Sequence |
0- ACGUGUGUAUGUGGGCUUAUG -21
Get sequence
|
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| Mature sequence |
Dmo-Novel-16_3p |
| mirBase accession | None |
|---|
| Sequence |
38- GUGAGCCCAUUUACAUGUGUGU -60
Get sequence
|
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