| MirGeneDB ID | Dmo-Novel-13 |
|---|
| Family name |
DMO-NOVEL-13 (all species) |
|---|
| Species |
Fruit fly (Drosophila mojavensis) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
D. mojavensis
|
|---|
| Node of Origin (family) |
D. mojavensis
|
|---|
Genome context
(Dmoj_caf1) |
scaffold_6473: 1018016-1018077 [+]
Ensembl
|
|---|
| Seed |
AUGAAAC |
|---|
Precursor
(pre-Mir +30nt flank) |
UAUGAACUCAUCAUCCAGUGAAUCAAUCUUAAUGAAACUUGGCAUAGAUGCUGCUAAUUGCUGCAGUCAGCAUAUAUGUUGAAGUUGGUUGGAUCGUAUCACUAUAUCAUCAGUUUAAUAAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UAUGAACUCAUCAUCCA---| AUCA U G AC UG G CUAAUU
GUGA AUCU AAU AA U GCAUA AUGCUG G
CACU UAGG UUG UU A UGUAU UACGAC C
GAAUAAUUUGACUACUAUAU^ AUGC - G GA GU A UGACGU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Dmo-Novel-13_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AAUGAAACUUGGCAUAGAUGCUGC -24
Get sequence
|
|---|
| Star sequence |
Dmo-Novel-13_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- GCAUAUAUGUUGAAGUUGGUUGG -62
Get sequence
|
|---|
