MirGeneDB 2.1

MirGeneDB ID

Dmo-Mir-9707

Family name MIR-9707 (all species)
Seed GCCAAGU
Species Fruit fly (Drosophila mojavensis)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) D. mojavensis
Node of Origin (family) D. mojavensis
Genome context
(Dmoj_caf1)
scaffold_6500: 10610654-10610715 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUUAACAAUAGCAAAAACAUAACAAAAUAAUGCCAAGUAUGCAGCACGUUGAUGUUGUACGUGUUAUCUCAACGGAUUGCAUACUUGGGAAAUUUUGUGAAUGUGUAUUAUGUUGCUGAUGU
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Structure
        10          20         30        40        50        60
AUUAACAAUAGCAAAAA--   A-|      AAUG            CA      UGUUGUA 
                   CAU  ACAAAAU    CCAAGUAUGCAG  CGUUGA       C
                   GUA  UGUUUUA    GGUUCAUACGUU  GCAACU       G
UGUAGUCGUUGUAUUAUGU   AG^      AAG-            AG      CUAUUGU 
120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
 +
Em Fe Ma Ma
Mature sequence

Dmo-Mir-9707_5p

mirBase accessionNone
Sequence
0- UGCCAAGUAUGCAGCACGUUGA -22
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Star sequence

Dmo-Mir-9707_3p*

mirBase accessionNone
Sequence
40- AACGGAUUGCAUACUUGGGAAA -62
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