| MirGeneDB ID | Dme-Mir-9388 |
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| Family name |
MIR-9388 (all species) |
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| Species |
Fruit fly (Drosophila melanogaster) |
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| MiRBase ID |
dme-mir-9388
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
D. melanogaster
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| Node of Origin (family) |
D. melanogaster
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Genome context
(Drosophila_melanogaster_BDGP6) |
3L: 22945131-22945192 [+]
UCSC
Ensembl
|
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| Seed |
GUAGUAC |
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Precursor
(pre-Mir +30nt flank) |
CCAAGAAACGCUAUCCAAGUAUUUUGGUACGUAUGUAUGUAUGUACAUACAUGUGUAUAUGGUACAUUCAUGUAGUACAUACAUACAUAUGUAUGCAAGUACGUACGAACGCUCGACAAUUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CCAAGAAACGCUAUCCAA--| UG A UGUAUAU
GUAUUU GUACGUAUGUAUGUAUGUAC UACAUG \
CAUGAA UAUGUAUACAUACAUACAUG AUGUAC G
CUUAACAGCUCGCAAGCAUG^ CG - UUACAUG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UGUG in loop |
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Tissue expression
|
|
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| Star sequence |
Dme-Mir-9388_5p* |
| mirBase accession | MIMAT0035238 |
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| Sequence |
0- GUAUGUAUGUAUGUACAUACAUG -23
Get sequence
|
|---|
| Mature sequence |
Dme-Mir-9388_3p |
| mirBase accession | MIMAT0035239 |
|---|
| Sequence |
40- UGUAGUACAUACAUACAUAUGU -62
Get sequence
|
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