| MirGeneDB ID | Dlo-Mir-6040 |
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| Family name |
MIR-6040 (all species) |
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| Species |
Braconid wasp (Diachasmimorpha longicaudata) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
D. longicaudata
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| Node of Origin (family) |
D. longicaudata
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Genome context
(GCF_034640455.1_iyDiaLong2_genomic) |
NC_087228.1: 9105818-9105878 [-]
Ensembl
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| Seed |
AGUACGG |
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Precursor
(pre-Mir +30nt flank) |
CUUAUCAAUGUUUCAUUAGCAAUCCCAAUACCUUAGUACGAGCUUGUACUGUGUUAUAUAACUAUCAUAGUACGGCUCCAGUACUGAGAAAUUGUGAUUGUUUCAAUCACUUUUUUGUAUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CUUAUCAAUGUUUCAUU-- C AC --| U UUAUA
AGCAAUC CAAU CUUAGUAC GAGCU GUACUGUG U
UUGUUAG GUUA GAGUCAUG CUCGG CAUGAUAC A
UUAUGUUUUUUCACUAACU U AA AC^ - UAUCA
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | The 5p arm might be monoadenylated at the 3' end. |
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Star sequence |
Dlo-Mir-6040_5p* |
| mirBase accession | None |
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| Sequence |
0- CCUUAGUACGAGCUUGUACUGUG -23
Get sequence
|
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| Mature sequence |
Dlo-Mir-6040_3p |
| mirBase accession | None |
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| Sequence |
37- UAGUACGGCUCCAGUACUGAGAAA -61
Get sequence
|
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