| MirGeneDB ID | Cte-Mir-2710 |
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| Family name |
MIR-2710 (all species) |
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| Species |
Polychaete worm (Capitella teleta) |
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| MiRBase ID |
cte-mir-2710
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. teleta
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| Node of Origin (family) |
C. teleta
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Genome context
(Capitella_teleta_v1.0) |
CAPTEscaffold_445: 46126-46181 [-]
Ensembl
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| Seed |
CCACUGU |
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Precursor
(pre-Mir +30nt flank) |
UAUCACAUGAUAGUUCUGGUAUCAGCAGGGUCCACUGUACCGUAUUGGCCCUUUAUUCUGAUAGGGCAGUGUGGUACAAGGGAACCCUGAGGAGACCAUGGGCAGCAAUUUUUAUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UAUCACAUGAUAGUUCU-- A AG -| AC G UUAU
GGU UC CAGGG UCC UGUACCGUAUUG CCCU U
CCA AG GUCCC AGG ACAUGGUGUGAC GGGA C
UUAUUUUUAACGACGGGUA G GA A^ GA - UAGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Cte-Mir-2710_5p |
| mirBase accession | MIMAT0013579 |
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| Sequence |
0- UCCACUGUACCGUAUUGGCCCU -22
Get sequence
|
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| Star sequence |
Cte-Mir-2710_3p* |
| mirBase accession | None |
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| Sequence |
34- GGCAGUGUGGUACAAGGGAACC -56
Get sequence
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