| MirGeneDB ID | Cte-Mir-2706 |
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| Family name |
MIR-2706 (all species) |
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| Species |
Polychaete worm (Capitella teleta) |
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| MiRBase ID |
cte-mir-2706
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. teleta
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| Node of Origin (family) |
C. teleta
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Genome context
(Capitella_teleta_v1.0) |
CAPTEscaffold_518: 98983-99044 [+]
Ensembl
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| Seed |
AAGAUAU |
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Precursor
(pre-Mir +30nt flank) |
AGCUGCGAGGAAAUCAUGGAUGGGGUCGAGUGCUGGAAGCUUGUAUCUAUGUCUGUAAUUCAAUGAUAUUGAAGAUAUGACCUUCCUGCACUGGACCUUCUGCCUCUCGGCGGCCACCUCGC
Get precursor sequence
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| Structure | 10 20 30 40 50 60
AGCUGCGAGGAAAUCAU- AU-| G U C UG AUGUCUGUAAU
GG GGGGUC AGUGC GGAAG U UAUCU U
CC UUCCAG UCACG CCUUC A AUAGA C
CGCUCCACCGGCGGCUCU GUC^ G U C GU AGUUAUAGUAA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Star sequence |
Cte-Mir-2706_5p* |
| mirBase accession | None |
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| Sequence |
0- UGCUGGAAGCUUGUAUCUAUGUC -23
Get sequence
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| Mature sequence |
Cte-Mir-2706_3p |
| mirBase accession | MIMAT0013573 |
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| Sequence |
40- GAAGAUAUGACCUUCCUGCACU -62
Get sequence
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