| MirGeneDB ID | Cte-Mir-2704 |
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| Family name |
MIR-2704 (all species) |
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| Species |
Polychaete worm (Capitella teleta) |
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| MiRBase ID |
cte-mir-2704
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. teleta
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| Node of Origin (family) |
C. teleta
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Genome context
(Capitella_teleta_v1.0) |
CAPTEscaffold_102: 389220-389279 [+]
Ensembl
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| Seed |
CAUGCAA |
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Precursor
(pre-Mir +30nt flank) |
UGAUAAUCAGAAUAAACGAAGUCCAUUUUAACAUGCAAAAUUGACCCGGGUUUUAGUUGAAGAUUGAACCCGAGCCAUUUCUGCUUGUUCUGAUGGCCUCACUACCAGCCAACAGAGCCU
Get precursor sequence
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| Structure | 10 20 30 40 50
UGAUAAUCAGAAUAAAC---| A U UU U A U ACC UUAGUU
GA G CCAUU AACA GCA AA UG CGGGUU G
CU C GGUAG UUGU CGU UU AC GCCCAA A
UCCGAGACAACCGACCAUCA^ C - UC U C U CGA GUUAGA
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Cte-Mir-2704_5p |
| mirBase accession | MIMAT0013569 |
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| Sequence |
0- ACAUGCAAAAUUGACCCGGGUU -22
Get sequence
|
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| Star sequence |
Cte-Mir-2704_3p* |
| mirBase accession | None |
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| Sequence |
38- CCCGAGCCAUUUCUGCUUGUUC -60
Get sequence
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