| MirGeneDB ID | Cte-Mir-2703-P1 |
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| Family name |
MIR-2703 (all species) |
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| Species |
Polychaete worm (Capitella teleta) |
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| MiRBase ID |
cte-mir-2703-1
|
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| Paralogues |
Cte-Mir-2703-P2
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| Orthologues |
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| Node of Origin (locus) |
C. teleta
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| Node of Origin (family) |
C. teleta
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Genome context
(Capitella_teleta_v1.0) |
CAPTEscaffold_394: 5014-5072 [-]
Ensembl
|
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| Seed |
GCUUUGA |
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Precursor
(pre-Mir +30nt flank) |
UUCAGCUCAGAGAAGACGGAACCAGUGACUUGAGCUUACGAAUCAUCAGCCAUUGCUCGCUUUGAAAUGCUUUGAUUUGUAAGCUCAGCAGGCGUGGUUUCAAAUGCAACAGAUGACCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUCAGCUCAGAGAAGAC- -| GAC UC C GCUCG
GGAACCA GU UUGAGCUUACGAAUCA AGC AUU \
CUUUGGU CG GACUCGAAUGUUUAGU UCG UAA C
ACCAGUAGACAACGUAAA G^ GAC U- - AGUUU
110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Cte-Mir-2703-P1_5p* |
| mirBase accession | MIMAT0013567 |
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| Sequence |
0- UGAGCUUACGAAUCAUCAGCCAUU -24
Get sequence
|
|---|
| Mature sequence |
Cte-Mir-2703-P1_3p |
| mirBase accession | MIMAT0013568 |
|---|
| Sequence |
37- UGCUUUGAUUUGUAAGCUCAGC -59
Get sequence
|
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