| MirGeneDB ID | Cte-Mir-2697 |
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| Family name |
MIR-2697 (all species) |
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| Seed |
GCUAUGU |
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| Species |
Polychaete worm (Capitella teleta) |
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| MiRBase ID |
cte-mir-2697
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. teleta
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| Node of Origin (family) |
C. teleta
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Genome context
(Capitella_teleta_v1.0) |
CAPTEscaffold_434: 7355-7410 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CUCAUUUUGUUUAUAGGAAGUAGCUGGCUGAGCUAUGUCCAUCCGCCAUCCGUUGCAAUGAUCGGAUGUCAGCUGGACAUAUCACAGAAAGCUCUUCAAGUCGUCUAACGUAUGUG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CUCAUUUUGUUUAUAGG---| U GG AGC UCCGC UUGC
AAG AGCU CUG UAUGUCCA CAUCCG A
UUC UCGA GAC AUACAGGU GUAGGC A
GUGUAUGCAAUCUGCUGAAC^ - AA ACU CGACU UAGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| Comment | A star has not yet been recorded from this miRNA but it is deeply conserved across sedentarian annelids. |
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Cte-Mir-2697_5p |
| mirBase accession | MIMAT0013558 |
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| Sequence |
0- AGCUAUGUCCAUCCGCCAUCCG -22
Get sequence
|
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| Star sequence |
Cte-Mir-2697_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
34- GAUGUCAGCUGGACAUAUCACA -56
Get sequence
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