| MirGeneDB ID | Csc-Novel-2-P1a |
|---|
| Family name |
CSC-NOVEL-2 (all species) |
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| Species |
Arizona bark scorpion (Centruroides sculpturatus) |
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| MiRBase ID |
|
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| Paralogues |
Csc-Novel-2-P1b
|
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| Orthologues |
|
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| Node of Origin (locus) |
C. sculpturatus
|
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| Node of Origin (family) |
C. sculpturatus
|
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Genome context
(GCF_000671375.1_CSC) |
NW_019387203.1: 10097-10155 [+]
Ensembl
|
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| Seed |
CAAUUCA |
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Precursor
(pre-Mir +30nt flank) |
UUACAAUUUUCUGAUGGAAUUGGAUUUUUCUGUAGAACUAGAUGAAUUGAUAGAGUUUUUAAAUCCAUCAAUUCAUCCAAUUCCACAGCAAUGUCUAUUUGUACACAACUCCAAUCAUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUACAAUUUUCUGAUGG--| U U U A CUA AGAGUUU
AA UGGAU UU CUGU GAA GAUGAAUUGAU \
UU AUCUG AA GACA CUU CUACUUAACUA U
UUACUAACCUCAACACAUG^ U U C C AAC CCUAAAU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Csc-Novel-2-P1a_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UGUAGAACUAGAUGAAUUGAUA -22
Get sequence
|
|---|
| Mature sequence |
Csc-Novel-2-P1a_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UCAAUUCAUCCAAUUCCACAGC -59
Get sequence
|
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