| MirGeneDB ID | Csc-Novel-1 |
|---|
| Family name |
CSC-NOVEL-1 (all species) |
|---|
| Species |
Arizona bark scorpion (Centruroides sculpturatus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
C. sculpturatus
|
|---|
| Node of Origin (family) |
C. sculpturatus
|
|---|
Genome context
(GCF_000671375.1_CSC) |
NW_019384475.1: 289440-289501 [-]
Ensembl
|
|---|
| Seed |
UACCAAA |
|---|
Precursor
(pre-Mir +30nt flank) |
ACAUUAAGUGAGCUGAAAAGAGCUACACCUAUACCAAAUUCGUUCGAGAUCUGUACAAUAAAAUAAGCAGAACUCAACCGAAAUUGGUAUUGGUGAAGUCCUUAAGAAUUCAGACUAGAAAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
ACAUUAAGUGAGCUGAA--| AG A U A UUC A GUACAAU
AAG CU CACC AUACCAA UUCG GAG UCU A
UUC GA GUGG UAUGGUU AAGC CUC AGA A
UAAAGAUCAGACUUAAGAA^ CU A U A CAA A CGAAUAA
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Csc-Novel-1_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AUACCAAAUUCGUUCGAGAUCU -22
Get sequence
|
|---|
| Co-mature sequence |
Csc-Novel-1_3p |
| mirBase accession | None |
|---|
| Sequence |
40- AACUCAACCGAAAUUGGUAUUG -62
Get sequence
|
|---|
