Mir-190-P17

MirGeneDB ID

Csc-Mir-190-P17

Family name

MIR-190 (all species)

Species

Arizona bark scorpion (Centruroides sculpturatus)

MiRBase ID

Paralogues

Csc-Mir-190-P18

Orthologues

Aae-Mir-190 Aga-Mir-190 Agr-Mir-190 Asu-Mir-190 Bfl-Mir-190 Bge-Mir-190 Bko-Mir-190 Bla-Mir-190 Bpl-Mir-190 Cbr-Mir-190 Cel-Mir-190 Cte-Mir-190 Dan-Mir-190 Dlo-Mir-190 Dma-Mir-190 Dme-Mir-190 Dmo-Mir-190 Dpu-Mir-190 Dsi-Mir-190 Dya-Mir-190 Eba-Mir-190 Egr-Mir-190 Esc-Mir-190 Gpa-Mir-190 Gsa-Mir-190 Hme-Mir-190 Hmi-Mir-190 Hru-Mir-190 Isc-Mir-190 Mgi-Mir-190 Mom-Mir-190 Npo-Mir-190 Obi-Mir-190 Ofu-Mir-190 Ovu-Mir-190 Pau-Mir-190 Pca-Mir-190 Pdu-Mir-190 Pfl-Mir-190 Pmi-Mir-190 Pve-Mir-190 Rph-Mir-190 Sko-Mir-190 Sma-Mir-190 Snu-Mir-190 Tca-Mir-190 Tur-Mir-190 War-Mir-190 Xbo-Mir-190

Node of Origin (locus)

C. sculpturatus

Node of Origin (family)

Bilateria

Genome context
(GCF_000671375.1_CSC)

NW_019384895.1: 258792-258850 [+] Ensembl

Seed

GAUAUGU

Precursor
(pre-Mir +30nt flank)

UAUUUGCUGGUUUACUGCCUCCUAGCUGUAUGAUAUGUUUGAUAUUCUUGGUUGUGGCCUGACUUCAACCGAGGAUCAGACAUAUGCUUACAGAGAGGGGUGCAGACUGCAACUUUUCA

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Structure

        10         20        30         40        50          
UAUUUGCUGGUUUACUGC-     AG     UG-|         UA          UGGCC 
                   CUCCU  CUGUA   AUAUGUUUGA  UUCUUGGUUG     \
                   GGGGA  GACAU   UAUACAGACU  AGGAGCCAAC     U
ACUUUUCAACGUCAGACGU     GA     UCG^         --          UUCAG 
       110       100        90        80          70

Deep sequencing

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3' NTU

Unknown

Motifs

CNNC at 3p(+17)

Tissue expression

Fe	Fe	Fe	Fe	Ma	Ma	Ma

Mature sequence

Csc-Mir-190-P17_5p

mirBase accession

None

Sequence

0- UGAUAUGUUUGAUAUUCUUGGUUG -24

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Star sequence

Csc-Mir-190-P17_3p*

mirBase accession

None

Sequence

37- ACCGAGGAUCAGACAUAUGCUU -59

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