MirGeneDB 2.1

MirGeneDB ID

Cmi-Novel-6

Family name CMI-NOVEL-6 (all species)
Seed CGUGUGA
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) C. milii
Node of Origin (family) C. milii
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)
KI635876.1: 2920013-2920071 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAUCACACACAGGAGUAGGAAGUGCCCUGAUCGUGUGAAACUCUUUCCACAUGUAAAUUUGCCAAAUGUGGAAAGAGUUUCACGCGUUCAGGGUAACCUCCAGAGACACCAGUGAUCAC
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Structure
        10         20         30        40        50         
GAUCACACACAGGAGUA-   AG-|       U                     GUAAAU 
                  GGA   UGCCCUGA CGUGUGAAACUCUUUCCACAU      \
                  CCU   AUGGGACU GCGCACUUUGAGAAAGGUGUA      U
CACUAGUGACCACAGAGA   CCA^       U                     AACCGU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bl Br Ey Gi Gl He In Ki Li Mu Ov Pa Sk Sp Te Ut
Mature sequence

Cmi-Novel-6_5p

mirBase accessionNone
Sequence
0- UCGUGUGAAACUCUUUCCACAU -22
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Star sequence

Cmi-Novel-6_3p*

mirBase accessionNone
Sequence
37- GUGGAAAGAGUUUCACGCGUUC -59
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