MirGeneDB ID | Cja-Mir-766 |
Family name |
MIR-766 (all species) |
Species |
White-tufted-ear marmoset (Callithrix jacchus) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Hsa-Mir-766
Pab-Mir-766
|
Node of Origin (locus) |
Hominidae
|
Node of Origin (family) |
Hominidae
|
Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021937.1: 111582603-111582661 [-]
UCSC
Ensembl
|
Seed |
GGAGGAA |
Precursor (pre-Mir +30nt flank) |
UGCAUCCUCAGAGACUGCAGCUUGAGUGGUAGGAGGAAUAGGUGCUGGGCUUUCAAUUUUGGAUCUGACUCCAGUCCCACAGCCUCAGCCACCCCAGCCAAUUGUCAUAGGAGCUGAAU
Get precursor sequence
|
Structure | 10 20 30 40 50
UGCAUCCUCAGAGACUGCA--| UGA AG AAUA UG CUUUCAAUU
GCU GUGGU GAGG GG CUGGG U
CGA CACCG CUCC CC GACCU U
UAAGUCGAGGAUACUGUUAAC^ CCC A- GACA CU CAGUCUAGG
110 100 90 80 70 60 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Cja-Mir-766_5p (predicted) |
mirBase accession | None |
Sequence |
0- AGGAGGAAUAGGUGCUGGGCUUU -23
Get sequence
|
Star sequence |
Cja-Mir-766_3p* (predicted) |
mirBase accession | None |
Sequence |
37- ACUCCAGUCCCACAGCCUCAGC -59
Get sequence
|