MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-561

Family name MIR-561 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Hsa-Mir-561  Pab-Mir-561 
Node of Origin (locus) Simiiformes
Node of Origin (family) Simiiformes
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021920.1: 37319502-37319558 [-] UCSC Ensembl
Seed UCAAGGA
Precursor
(pre-Mir +30nt flank)		 
UGAAACUUCAUCCACCAGUCCUCCAGGAACAUCAAGGAUCUUAAACUUUGCUGGAUCUACAAAGACAAAGUUUAUAAUUCUUGAAGUUCCUUGGGGAAGCGUGGAUGAUCAUUUUUA
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Structure
        10          20        30        40        50        
UGAAACUUCAUCCACCAG--     C      A        CU         -| GGAU 
                    UCCUC AGGAAC UCAAGGAU  UAAACUUUG CU    C
                    AGGGG UCCUUG AGUUCUUA  AUUUGAAAC GA    U
AUUUUUACUAGUAGGUGCGA     U      A        AU         A^ AACA 
     110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
- +
To
Mature sequence

Cja-Mir-561_5p (predicted)
mirBase accessionNone
Sequence 
0- AUCAAGGAUCUUAAACUUUGCU -22
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Star sequence

Cja-Mir-561_3p* (predicted)
mirBase accessionNone
Sequence 
35- CAAAGUUUAUAAUUCUUGAAGU -57
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