MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-1908

Family name MIR-1908 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Hsa-Mir-1908  Mml-Mir-1908  Pab-Mir-1908 
Node of Origin (locus) Simiiformes
Node of Origin (family) Simiiformes
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021925.1: 115597810-115597867 [-] UCSC Ensembl
Seed GGCGGGG
Precursor
(pre-Mir +30nt flank)		 
CCGCAGUGAGAUUUGGGGCCGGGGAUGCCGCGGCGGGGACGGCGAUUGGUCCGGAUGCGUGGUGCCACCGGCCGCCGGCUCCGCCCUGGACCCCGCCCCACAGGCCUCAUCACCUAUA
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Structure
        10            20        30        40        50        
CCGCAGUGAGAUUUGGGGC----|    AUG   C       A     AU    CCGGAUG 
                       CGGGG   CCG GGCGGGG CGGCG  UGGU       C
                       GCCCC   GGU CCGCCUC GCCGC  GCCA       G
AUAUCCACUACUCCGGACACCCC^    A--   C       G     CG    CCGUGGU 
      110       100        90          80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Cja-Mir-1908_5p
mirBase accessionNone
Sequence 
0- CGGCGGGGACGGCGAUUGGUC -21
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Star sequence

Cja-Mir-1908_3p* (predicted)
mirBase accessionNone
Sequence 
35- CACCGGCCGCCGGCUCCGCCCUG -58
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