MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-1286

Family name MIR-1286 (all species)
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Hsa-Mir-1286  Pab-Mir-1286 
Node of Origin (locus) Simiiformes
Node of Origin (family) Simiiformes
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021915.1: 209464348-209464403 [-] UCSC Ensembl
Seed GUGGGAC
Precursor
(pre-Mir +30nt flank)		 
CUGGCCACUUCCUCAUUAGCAUCCUCUGGGGACUCAGCUUGCUCUGGCUGCUGGAUUGAAUUAGCUGUGGGACCAAGAUGAGCCCUUGGUGGAGACAGGAUUCUCCAGAUAAUUAG
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Structure
        10        20          30        40        50       
CUGGCCACUUCCUCAUUAGCA--|  U UG   A    G    C   G  U  UGGAU 
                       UCC C  GGG CUCA CUUG UCU GC GC     U
                       AGG G  UCC GAGU GAAC AGG UG CG     G
GAUUAAUAGACCUCUUAGGACAG^  U GU   C    A    C   G  U  AUUAA 
    110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Cja-Mir-1286_5p* (predicted)
mirBase accessionNone
Sequence 
0- GACUCAGCUUGCUCUGGCUGC -21
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Mature sequence

Cja-Mir-1286_3p (predicted)
mirBase accessionNone
Sequence 
35- UGUGGGACCAAGAUGAGCCCU -56
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