MirGeneDB 2.1
MirGeneDB ID

Cel-Mir-59

Family name MIR-59 (all species)
Seed CGAAUCG
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-59
Paralogues
Orthologues
Node of Origin (locus) C. elegans
Node of Origin (family) C. elegans
Genome context
(ce11)		 chrIV: 11309169-11309234 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUGAUAUUUUGAGUUGAUCUAGAUAUGACAUCGUCCUGAAAACGAAACGGAACAAAAGUUCAAGAUAUUGAUUUCGAAUCGUUUAUCAGGAUGAUGUGAUUAAAAUCAACUCGGACGGUAAGCGAG
Get precursor sequence
Structure
        10        20            30         40        50        60  
AUGAUAUUUUGAGUUGAUCUA   ----  G            -|     AA     CAAAAGUUC 
                     GAU    AU ACAUCGUCCUGA AAACGA  CGGAA         \
                     CUA    UA UGUAGUAGGACU UUUGCU  GCUUU         A
GAGCGAAUGGCAGGCUCAA--   AAAU  G            A^     AA     AGUUAUAGA 
    120       110         100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Wt Da Ea Mi Yo Yo
Star sequence

Cel-Mir-59_5p*
mirBase accessionMIMAT0015101
Sequence 
0- UCGUCCUGAAAACGAAACGGAA -22
Get sequence
Proposed targets microrna.org: MIMAT0015101
Mature sequence

Cel-Mir-59_3p
mirBase accessionMIMAT0000031
Sequence 
43- UCGAAUCGUUUAUCAGGAUGAUG -66
Get sequence
Proposed targets microrna.org: MIMAT0000031
TargetScanWorm: cel-miR-59