| MirGeneDB ID | Cel-Mir-4814 |
|---|
| Family name |
MIR-4814 (all species) |
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| Species |
Roundworm (Caenorhabditis elegans) |
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| MiRBase ID |
cel-mir-4814
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. elegans
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| Node of Origin (family) |
C. elegans
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Genome context
(ce11) |
chrIII: 13728430-13728495 [-]
UCSC
Ensembl
|
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| Seed |
GGGCAAA |
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Precursor
(pre-Mir +30nt flank) |
CGGCGCCACUUUUAAACCAACUUUACCCACUUCUCAACCAACUUUGGCCACUUUUCAACUGCCAUUCACAGAAGUGGGCAAAGUUGGUUGAGAAGUGGGUAAAGUUGGGCAAAGUUGGUUAAAGUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CGGCGCCACUUUUAAAC--| G UUUCAACUG
CAACUUUACCCACUUCUCAACCAACUUUG CCACU C
GUUGAAAUGGGUGAAGAGUUGGUUGAAAC GGUGA C
UUGAAAUUGGUUGAAACGG^ G AGACACUUA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Cel-Mir-4814_5p* |
| mirBase accession | MIMAT0020002 |
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| Sequence |
0- UUCUCAACCAACUUUGGCCACU -22
Get sequence
|
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| Mature sequence |
Cel-Mir-4814_3p |
| mirBase accession | MIMAT0020003 |
|---|
| Sequence |
44- UGGGCAAAGUUGGUUGAGAAGU -66
Get sequence
|
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