| MirGeneDB ID | Cbr-Novel-3 |
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| Family name |
CBR-NOVEL-3 (all species) |
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| Seed |
GACCACG |
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| Species |
Roundworm (Caenorhabditis briggsae) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. briggsae
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| Node of Origin (family) |
C. briggsae
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Genome context
(CB4) |
II: 5323957-5324011 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGCUCCAACAAAAAAUUCCGUCUUUCCAUACACAGAAGAUUUUGUGGUGAUAACAACAACUUAUGACCACGGACCCUUCUGUAUCUGGAAGAACCGGAAUCCUUUAAGUAAUAUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGCUCCAACAAAAAAUU- UC-| UAC AU G ACAA
CCG UUUCCA ACAGAAG UUUGUGGU AUA \
GGC GAAGGU UGUCUUC AGGCACCA UAU C
UUAUAAUGAAUUUCCUAA CAA^ CUA CC G UCAA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| 01 |
02 |
03 |
04 |
05 |
06 |
07 |
08 |
09 |
10 |
11 |
12 |
13 |
14 |
15 |
16 |
Cb |
Ea |
Ma |
Yo |
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| Star sequence |
Cbr-Novel-3_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CACAGAAGAUUUUGUGGUGAUA -22
Get sequence
|
|---|
| Mature sequence |
Cbr-Novel-3_3p |
| mirBase accession | None |
|---|
| Sequence |
33- UGACCACGGACCCUUCUGUAUC -55
Get sequence
|
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