MirGeneDB ID | Cbr-Mir-7593 |
Family name |
MIR-7593 (all species) |
Seed |
GAGGUAU |
Species |
Roundworm (Caenorhabditis briggsae) |
MiRBase ID |
cbr-mir-7593
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Paralogues |
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Orthologues |
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Node of Origin (locus) |
C. briggsae
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Node of Origin (family) |
C. briggsae
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Genome context (CB4) |
X: 15669654-15669711 [-]
Ensembl
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Precursor (pre-Mir +30nt flank) |
CUAUUAUUCCAAUCACAACUCACGACUGGUAAGCUUGCACGAUCACCUCUCAACCAGCACAAUGAGUUGAGGUAUUGUAAAAGCUUACUGGUCGUUUUGAGCUGCAAAUUGAUUCGAU
Get precursor sequence
|
Structure | 10 20 30 40 50
CUAUUAUUCCAAUCACAACUC--| UG GC C UCAACCAGC
ACGAC GUAAGCUU ACGAU ACCUC \
UGCUG CAUUCGAA UGUUA UGGAG A
UAGCUUAGUUAAACGUCGAGUUU^ GU AA - UUGAGUAAC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
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3' NTU |
No
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Motifs | No |
Tissue expression
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Cb |
Ea |
Ma |
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Star sequence |
Cbr-Mir-7593_5p* |
mirBase accession | None |
Sequence |
0- AAGCUUGCACGAUCACCUCUCAAC -24
Get sequence
|
Mature sequence |
Cbr-Mir-7593_3p |
mirBase accession | MIMAT0029599 |
Sequence |
37- UGAGGUAUUGUAAAAGCUUAC -58
Get sequence
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