MirGeneDB 2.1

MirGeneDB ID

Cbr-Mir-7579

Family name MIR-7579 (all species)
Seed GAGGACC
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-7579
Paralogues
Orthologues
Node of Origin (locus) C. briggsae
Node of Origin (family) C. briggsae
Genome context
(CB4)
V: 3694986-3695050 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUAUGAAAAAAAUGAAGAUGUCACAUGUUCACAGUAUUCUCUGUAGCCUUAUCAAUUUUCACUGUGUAAAAUUGAGGACCAGUAGAAUGCUGUAGACGUGUUUGACAACUCCUAUUUGAAGGUAA
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Structure
        10        20          30        40         50        60  
CUAUGAAAAAAAUGAAGA    --      UC          -|  UAG     UCAAUUUUCA 
                  UGUC  ACAUGU  ACAGUAUUCU CUG   CCUUA          \
                  ACAG  UGUGCA  UGUCGUAAGA GAC   GGAGU          C
AAUGGAAGUUUAUCCUCA    UU      GA          U^  CA-     UAAAAUGUGU 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 Cb Ea Ma Yo
Star sequence

Cbr-Mir-7579_5p*

mirBase accessionNone
Sequence
0- ACAGUAUUCUCUGUAGCCUUAUC -23
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Mature sequence

Cbr-Mir-7579_3p

mirBase accessionMIMAT0029580
Sequence
42- UGAGGACCAGUAGAAUGCUGUAG -65
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