| MirGeneDB ID | Cbr-Mir-73-P1b |
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| Family name |
MIR-73 (all species) |
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| Seed |
GGCAAGA |
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| Species |
Roundworm (Caenorhabditis briggsae) |
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| MiRBase ID |
cbr-mir-73b
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| Paralogues |
Cbr-Mir-73-P1a
Cbr-Mir-73-P2a
Cbr-Mir-73-P2b
Cbr-Mir-73-P3a
Cbr-Mir-73-P3b
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| Orthologues |
Cel-Mir-73-P1
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| Node of Origin (locus) |
C. briggsae
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| Node of Origin (family) |
Caenorhabditis
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Genome context
(CB4) |
I: 6796238-6796300 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUCGCCUAAAAAACGUCCCAAAAUUCCGAUCCGGCUUCCACAUCGAGCCUCAGCUAGAUCCAUAACUUGCUGGCAAGAUGUUGGCAGUCGCAUUGGAUAAAGGAGACACUUGAAAUAUUAGUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UUCGCCUAAAAAACGUC---| AAAAU C U - GA UC UAGAUC
CC UCCGAU CGGCU CCA CAUC GCC AGC C
GG AGGUUA GCUGA GGU GUAG CGG UCG A
UUGAUUAUAAAGUUCACAGA^ AAAU- C C U AA -- UUCAAU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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Cb |
Ea |
Ma |
Yo |
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| Star sequence |
Cbr-Mir-73-P1b_5p* |
| mirBase accession | None |
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| Sequence |
0- CCGGCUUCCACAUCGAGCCUCAGC -24
Get sequence
|
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| Mature sequence |
Cbr-Mir-73-P1b_3p |
| mirBase accession | MIMAT0011464 |
|---|
| Sequence |
40- UGGCAAGAUGUUGGCAGUCGCAU -63
Get sequence
|
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