| MirGeneDB ID | Bta-Mir-7862 |
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| Family name |
MIR-7862 (all species) |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-7862
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
B. taurus
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| Node of Origin (family) |
B. taurus
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037336.1: 60574890-60574953 [-]
UCSC
Ensembl
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| Seed |
ACAGCUC |
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Precursor
(pre-Mir +30nt flank) |
GACUGUGCCUGGCAUAGGGCUGCCGCGUCGCACAGCUCCAGGGGACGCCGUUCCUGUCCUGGACUAUGUGAGUGGUGCUCCCUGGAGCUGAGCAGCGCACAGCCUGCUCACACCUACAUGGCGG
Get precursor sequence
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| Structure | 10 20 30 40 50 60
GACUGUGCCUGGCAUAG---| CC C A GA CCUGUCCU
GGCUG GCGU GC CAGCUCCAGGG CGCCGUU G
CCGAC CGCG CG GUCGAGGUCCC GUGGUGA G
GGCGGUACAUCCACACUCGU^ A- A A UC GUGUAUCA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Mature sequence |
Bta-Mir-7862_5p |
| mirBase accession | None |
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| Sequence |
0- CACAGCUCCAGGGGACGCCGUU -22
Get sequence
|
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| Star sequence |
Bta-Mir-7862_3p* |
| mirBase accession | MIMAT0030442 |
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| Sequence |
42- UGGUGCUCCCUGGAGCUGAGCA -64
Get sequence
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| Proposed targets |
TargetScanVert: bta-miR-7862
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