| MirGeneDB ID | Bta-Mir-2388 |
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| Family name |
MIR-2388 (all species) |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-2388
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
B. taurus
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| Node of Origin (family) |
B. taurus
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037352.1: 34785323-34785381 [-]
UCSC
Ensembl
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| Seed |
GCUCCCG |
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Precursor
(pre-Mir +30nt flank) |
GAAAUAUCCAGCCAGGACCCAUAAGGAGUCAGCUCCCGUCUCCUCUGUGCUGAGUCACAAGGAUCGCAGCUCGAGGAAGCUGGAGAUGACUUGUGAUGGGGUUACCACGCAGGGGCUCC
Get precursor sequence
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| Structure | 10 20 30 40 50
GAAAUAUCCAGCCAGGA--| AAG G C UC U U AGUCAC
CCCAU GAGUCA CUCC G UCCUC G GCUG A
GGGUA UUCAGU GAGG C AGGAG C CGAC A
CCUCGGGGACGCACCAUUG^ GUG A U GA - U GCUAGG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Mature sequence |
Bta-Mir-2388_5p |
| mirBase accession | MIMAT0011940 |
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| Sequence |
0- AGCUCCCGUCUCCUCUGUGCUG -22
Get sequence
|
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| Proposed targets |
TargetScanVert: bta-miR-2388-5p
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| Co-mature sequence |
Bta-Mir-2388_3p |
| mirBase accession | MIMAT0011941 |
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| Sequence |
38- GCUCGAGGAAGCUGGAGAUGA -59
Get sequence
|
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| Proposed targets |
TargetScanVert: bta-miR-2388-3p
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