| MirGeneDB ID | Bta-Mir-2336 |
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| Family name |
MIR-2336 (all species) |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-2336
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
B. taurus
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| Node of Origin (family) |
B. taurus
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037346.1: 22253986-22254043 [+]
UCSC
Ensembl
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| Seed |
UAACCGU |
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Precursor
(pre-Mir +30nt flank) |
ACACUGAAACUAUUUCAGUUAAAUAGAAAGCAUUUCAAAGCUAAGGUUAUGGGUGGCAAUUUAUCCCUAACCGUAACUUUGAAGUGCUUUCUGUUUAACCGUCCCUGGGGAUGCAGAG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
ACACUGAAACUAUUUCA--| C A U GUGGCA
GUUAAAUAGAAAGCAUUUCAAAG UA GGUUA GG \
CAAUUUGUCUUUCGUGAAGUUUC AU CCAAU CC A
GAGACGUAGGGGUCCCUGC^ A G - CUAUUU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UGUG in loop |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Star sequence |
Bta-Mir-2336_5p* |
| mirBase accession | None |
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| Sequence |
0- CAUUUCAAAGCUAAGGUUAUGG -22
Get sequence
|
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| Mature sequence |
Bta-Mir-2336_3p |
| mirBase accession | MIMAT0011869 |
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| Sequence |
36- CUAACCGUAACUUUGAAGUGCU -58
Get sequence
|
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| Proposed targets |
TargetScanVert: bta-miR-2336
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