MirGeneDB ID | Bta-Mir-2331 |
Family name |
MIR-2331 (all species) |
Species |
Cow (Bos taurus) |
MiRBase ID |
bta-mir-2331
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Paralogues |
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Orthologues |
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Node of Origin (locus) |
B. taurus
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Node of Origin (family) |
B. taurus
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Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037346.1: 14988935-14988999 [+]
UCSC
Ensembl
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Seed |
GCUUCCG |
Precursor (pre-Mir +30nt flank) |
GGAAAGCCAGGAAUCCAGGCCCUUGAGGGUGGCUUCCGUGCCUGCAGAUGUCUGUGAAUUCCUCAAGGCUGAGACCCUGCAGCCAAAGAAGCUACCCACGUGGGCUGCUCAGCUCAAACACUCAC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GGAAAGCCAGGAAUCCA--| U A CG C AU GUGAAUUC
GGCCC UG GGGUGGCUUC UG CUGCAG GUCU C
UCGGG GC CCCAUCGAAG AC GACGUC CAGA U
CACUCACAAACUCGACUCG^ U A AA C C- GUCGGAAC
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
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3' NTU |
No
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Motifs | UGUG in loop |
Tissue expression
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Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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Mature sequence |
Bta-Mir-2331_5p |
mirBase accession | MIMAT0011863 |
Sequence |
0- GGCUUCCGUGCCUGCAGAUGUCU -23
Get sequence
|
Proposed targets |
TargetScanVert: bta-miR-2331-5p
|
Star sequence |
Bta-Mir-2331_3p* |
mirBase accession | MIMAT0011864 |
Sequence |
43- ACCCUGCAGCCAAAGAAGCUAC -65
Get sequence
|
Proposed targets |
TargetScanVert: bta-miR-2331-3p
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