| MirGeneDB ID | Ami-Mir-9607 |
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| Family name |
MIR-9607 (all species) |
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| Species |
American alligator (Alligator mississippiensis) |
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| MiRBase ID |
ami-mir-9607
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
A. mississippiensis
|
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| Node of Origin (family) |
A. mississippiensis
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Genome context
(GCF_000281125.3_ASM28112v4_AMI_add) |
NW_017710621.1: 16671372-16671425 [-]
UCSC
|
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| Seed |
UCUGUUC |
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Precursor
(pre-Mir +30nt flank) |
CAACAUGUCGCACAAACUCACUGUUCCCUUCUCUGUUCUUUUGCAUCUUUCAGACCAGGAUGAAAGAGCAGCAGAACUCAGCAGGGAGCAGAAUGAGAAAACCAUCCGCAGCAC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CAACAUGUCGCACAAACUCA---| U CU U A GAC
CUGUUCCCU CU GUUCU UUGC UCUUUCA C
GACGAGGGA GA CAAGA GACG AGAAAGU A
CACGACGCCUACCAAAAGAGUAA^ C CU C - AGG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Ami-Mir-9607_5p |
| mirBase accession | MIMAT0038358 |
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| Sequence |
0- CUCUGUUCUUUUGCAUCUUUCA -22
Get sequence
|
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| Co-mature sequence |
Ami-Mir-9607_3p |
| mirBase accession | MIMAT0038359 |
|---|
| Sequence |
32- AAAGAGCAGCAGAACUCAGCAG -54
Get sequence
|
|---|
