| MirGeneDB ID | Agr-Mir-12592 |
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| Family name |
MIR-12592 (all species) |
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| Species |
West Indian fuzzy chiton (Acanthopleura granulata ) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Mom-Mir-12592
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| Node of Origin (locus) |
Polyplacophora
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| Node of Origin (family) |
Polyplacophora
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Genome context
(GCA_016165875.1_ASM1616587v1_Acanthopleura_granulata) |
JABBOT010000004.1: 28923677-28923736 [-]
Ensembl
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| Seed |
UUGACAU |
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Precursor
(pre-Mir +30nt flank) |
CAGAGAAAAGUGAGACCUCUCGUUGUCACGCGACGGGACUUGAUGGUUAGAUCGCUGUUAUAAACUAGAUUGACAUCAAGUCUCGCCAUGUGAUCGCGAGAUUUGACCUCCAUCCACUAC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
CAGAGAAAAGUGAGACC--| U CGA GUUA GCUGUU
UCUCGU GUCACG CGGGACUUGAUG GAUC A
AGAGCG UAGUGU GCUCUGAACUAC UUAG U
CAUCACCUACCUCCAGUUU^ C ACC AG-- AUCAAA
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Agr-Mir-12592_5p* |
| mirBase accession | None |
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| Sequence |
0- CGACGGGACUUGAUGGUUAGAUCG -24
Get sequence
|
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| Mature sequence |
Agr-Mir-12592_3p |
| mirBase accession | None |
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| Sequence |
38- AUUGACAUCAAGUCUCGCCAUG -60
Get sequence
|
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