| MirGeneDB ID | Agr-Mir-12591 |
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| Family name |
MIR-12591 (all species) |
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| Species |
West Indian fuzzy chiton (Acanthopleura granulata ) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Mom-Mir-12591
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| Node of Origin (locus) |
Polyplacophora
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| Node of Origin (family) |
Polyplacophora
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Genome context
(GCA_016165875.1_ASM1616587v1_Acanthopleura_granulata) |
JABBOT010000003.1: 2630942-2631003 [-]
Ensembl
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| Seed |
UCCCUGU |
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Precursor
(pre-Mir +30nt flank) |
ACCGAUUGAAGGAAUUGCCUUGUGCCGUCAAUCCCUGUUCCCAAGCCAUCAGAGGAAGUUGAAGAUGAUGGCUUGCGAUUGAGCAGGGAUUGGGAGUGUAAGGCUUUUCAACACACUAUACA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
ACCGAUUGAAGGAAUUG-- UG CG C----| GAGGAA
CCUUG C UCAAUCCCUGUUC CAAGCCAUCA G
GGAAU G GGUUAGGGACGAG GUUCGGUAGU U
ACAUAUCACACAACUUUUC GU AG UUAGC^ AGAAGU
120 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Agr-Mir-12591_5p |
| mirBase accession | None |
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| Sequence |
0- AUCCCUGUUCCCAAGCCAUCA -21
Get sequence
|
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| Star sequence |
Agr-Mir-12591_3p* |
| mirBase accession | None |
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| Sequence |
37- AUGGCUUGCGAUUGAGCAGGGAUUG -62
Get sequence
|
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