| MirGeneDB ID | Adi-Novel-8 |
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| Family name |
ADI-NOVEL-8 (all species) |
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| Species |
Stony coral (Acropora digitifera) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
A. digitifera
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| Node of Origin (family) |
A. digitifera
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Genome context
(GCA_000222465.2_Adig_1.1_genomic) |
DF971289.1: 135603-135655 [+]
Ensembl
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| Seed |
CUGCCAA |
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Precursor
(pre-Mir +30nt flank) |
UUUUCUUGGAUUUUAAAGAACUCUGUGCUUUCUGCCAAUCGUCAGACAAACUACUUUGAUGGUUUCCUGGCGGUCGACAGAGUGGACAGAAUUUCUGUUGGCGAGAGUUGUUC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUUUCUUGGAUUUUAAA- C-| G - CCA AC ACU
GAA UCUGU CU UUCUG AUCGUCAG AAACU U
CUU AGACA GG GAGAC UGGCGGUC UUUGG U
CUUGUUGAGAGCGGUUGU UA^ - U AGC C- UAG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| Comment | There is a second Dicer cut +1 on both arms. |
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ad |
Ad |
Ad |
Ad |
Ad |
Ad |
Ad |
La |
La |
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| Mature sequence |
Adi-Novel-8_5p |
| mirBase accession | None |
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| Sequence |
0- UCUGCCAAUCGUCAGACAAACU -22
Get sequence
|
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| Star sequence |
Adi-Novel-8_3p* |
| mirBase accession | None |
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| Sequence |
32- UUUCCUGGCGGUCGACAGAGU -53
Get sequence
|
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