MirGeneDB 2.1

42 microRNA genes with seed GUAGUGU
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Pma-Mir-142-v2 None MIR-142 GUAGUGU None None NW_022638250.1 104351 104407 - Vertebrata Vertebrata No 1
Ebu-Mir-142-v3 None MIR-142 GUAGUGU None None FYBX02010728.1 1342342 1342400 - Vertebrata Vertebrata No 1
Ami-Mir-142-P1-v3 ami-mir-142-1 MIR-142 GUAGUGU MIMAT0038162 MIMAT0038163 NW_017709491.1 1358141 1358200 + Gnathostomata Vertebrata No 1
Bta-Mir-142-P1-v3 bta-mir-142 MIR-142 GUAGUGU MIMAT0003790 MIMAT0003791 NC_037346.1 9301445 9301503 - Gnathostomata Vertebrata No 1
Cfa-Mir-142-P1-v3 cfa-mir-142 MIR-142 GUAGUGU MIMAT0006736 None chr9 32977395 32977453 - Gnathostomata Vertebrata No 1
Cli-Mir-142-P1-v3 cli-mir-142 MIR-142 GUAGUGU MIMAT0038529 MIMAT0038530 scaffold281 47104 47163 + Gnathostomata Vertebrata No 1
Cmi-Mir-142-P1-v3 None MIR-142 GUAGUGU None None KI635901.1 108538 108595 - Gnathostomata Vertebrata No 1
Cpi-Mir-142-P1-v3 cpi-mir-142-1 MIR-142 GUAGUGU MIMAT0037766 MIMAT0037767 JH584397 249157 249216 - Gnathostomata Vertebrata No 1
Cpo-Mir-142-P1-v3 cpo-mir-142 MIR-142 GUAGUGU MIMAT0047008 MIMAT0047009 scaffold_53 558172 558230 + Gnathostomata Vertebrata No 1
Dno-Mir-142-P1-v3 dno-mir-142 MIR-142 GUAGUGU MIMAT0047657 MIMAT0047658 JH568468 518900 518958 - Gnathostomata Vertebrata No 1
Dre-Mir-142-P1-v3 dre-mir-142a MIR-142 GUAGUGU MIMAT0001838 MIMAT0003160 chr5 3170753 3170812 + Gnathostomata Vertebrata No 1
Ete-Mir-142-P1-v3 None MIR-142 GUAGUGU None None JH980319 16045200 16045258 + Gnathostomata Vertebrata No 1
Gga-Mir-142-P1-v3 gga-mir-142 MIR-142 GUAGUGU MIMAT0001193 MIMAT0001194 19 697460 697519 - Gnathostomata Vertebrata No 1
Gmo-Mir-142-P1-v3 gmo-mir-142-1 MIR-142 GUAGUGU MIMAT0044045 None GeneScaffold_4424 122655 122715 - Gnathostomata Vertebrata No 1
Hsa-Mir-142-P1-v3 hsa-mir-142 MIR-142 GUAGUGU MIMAT0000433 MIMAT0000434 chr17 58331245 58331303 - Gnathostomata Vertebrata No 1
Loc-Mir-142-P1-v3 None MIR-142 GUAGUGU None None LG22 3347500 3347559 - Gnathostomata Vertebrata No 1
Mal-Mir-142-P1-v3 None MIR-142 GUAGUGU None None KV885018.1 158174 158233 + Gnathostomata Vertebrata No 1
Mdo-Mir-142-P1-v3 mdo-mir-142 MIR-142 GUAGUGU None MIMAT0004112 2 174133944 174134002 + Gnathostomata Vertebrata No 1
Mml-Mir-142-P1-v3 mml-mir-142 MIR-142 GUAGUGU MIMAT0006199 MIMAT0006200 chr16 31321581 31321639 + Gnathostomata Vertebrata No 1
Mmu-Mir-142-P1-v3 mmu-mir-142a MIR-142 GUAGUGU MIMAT0000154 MIMAT0000155 chr11 87756867 87756925 + Gnathostomata Vertebrata No 1
Oan-Mir-142-P1-v3 oan-mir-142 MIR-142 GUAGUGU MIMAT0006982 MIMAT0006983 NC_041744.1 11231636 11231694 - Gnathostomata Vertebrata No 1
Ocu-Mir-142-P1-v3 ocu-mir-142 MIR-142 GUAGUGU MIMAT0048245 MIMAT0048246 chr19 29938908 29938966 + Gnathostomata Vertebrata No 1
Rno-Mir-142-P1-v3 rno-mir-142 MIR-142 GUAGUGU MIMAT0000847 MIMAT0000848 chr10 75050854 75050912 + Gnathostomata Vertebrata No 1
Sha-Mir-142-P1-v3 sha-mir-142 MIR-142 GUAGUGU MIMAT0022816 None GL856813.1 835383 835441 + Gnathostomata Vertebrata No 1
Sto-Mir-142-P1-v3 None MIR-142 GUAGUGU None None BFAA01007505.1 105407 105466 - Gnathostomata Vertebrata No 1
Tgu-Mir-142-P1-v3 tgu-mir-142 MIR-142 GUAGUGU MIMAT0014554 MIMAT0026999 Tgu-Mir-142-P1-v1_pre_19:468467-468608 42 101 - Gnathostomata Vertebrata No 1
Tni-Mir-142-P1-v3 tni-mir-142a MIR-142 GUAGUGU MIMAT0002909 None 7 2557223 2557282 + Gnathostomata Vertebrata No 1
Xtr-Mir-142-P1a-v3 xtr-mir-142-1 MIR-142 GUAGUGU MIMAT0003602 MIMAT0003603 chr2 38445593 38445652 + Xenopus Vertebrata No 1
Xla-Mir-142-P1a1-v3 None MIR-142 GUAGUGU None None NC_030726.1 41884054 41884113 + X. laevis Vertebrata No 1
Xla-Mir-142-P1a2-v3 None MIR-142 GUAGUGU None None NC_030726.1 41885024 41885083 + X. laevis Vertebrata No 1
Xtr-Mir-142-P1b-v3 xtr-mir-142-2 MIR-142 GUAGUGU MIMAT0003602 MIMAT0003603 chr2 38446775 38446834 + Xenopus Vertebrata No 1
Xla-Mir-142-P1b1-v3 xla-mir-142 MIR-142 GUAGUGU MIMAT0011139 None NC_030727.1 31425406 31425465 + X. laevis Vertebrata No 1
Xla-Mir-142-P1b2-v3 xla-mir-142-2 MIR-142 GUAGUGU MIMAT0046454 MIMAT0046455 NC_030727.1 31426969 31427028 + X. laevis Vertebrata No 1
Aca-Mir-142-P2-v3 aca-mir-142 MIR-142 GUAGUGU MIMAT0021767 MIMAT0021768 GL343287.1 1405171 1405231 - Gnathostomata Vertebrata No 1
Ami-Mir-142-P2-v3 ami-mir-142-2 MIR-142 GUAGUGU MIMAT0038164 MIMAT0038163 NW_017710586.1 18397 18455 - Gnathostomata Vertebrata No 1
Cpi-Mir-142-P2-v3 cpi-mir-142-2 MIR-142 GUAGUGU MIMAT0037766 MIMAT0037767 JH585047 322623 322682 - Gnathostomata Vertebrata No 1
Dre-Mir-142-P2-v3 dre-mir-142b MIR-142 GUAGUGU MIMAT0001839 None chr15 15383910 15383969 - Gnathostomata Vertebrata No 1
Gja-Mir-142-P2-v3 None MIR-142 GUAGUGU None None NW_015172599.1 181697 181757 - Gnathostomata Vertebrata No 1
Gmo-Mir-142-P2-v3 gmo-mir-142-2 MIR-142 GUAGUGU MIMAT0044045 MIMAT0044046 contig391504 965 1024 - Gnathostomata Vertebrata No 1
Mal-Mir-142-P2-v3 None MIR-142 GUAGUGU None None KV884934.1 669473 669532 + Gnathostomata Vertebrata No 1
Pbv-Mir-142-P2-v3 pbv-mir-142 MIR-142 GUAGUGU MIMAT0038953 MIMAT0038954 KE953330.1 386981 387041 - Gnathostomata Vertebrata No 1
Tni-Mir-142-P2-v3 tni-mir-142b MIR-142 GUAGUGU MIMAT0002946 None 16 3999100 3999159 + Gnathostomata Vertebrata No 1

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