MirGeneDB 2.1

MirGeneDB ID

Mmu-Mir-92-P2a

Family name MIR-92 (all species)
Seed AUUGCAC
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-367
Paralogues Mmu-Mir-92-P1a  Mmu-Mir-92-P1c  Mmu-Mir-92-P1d  Mmu-Mir-92-P2c  Mmu-Mir-92-P2d 
Orthologues Aca-Mir-92-P2a  Ami-Mir-92-P2a  Asu-Mir-92  Bfl-Mir-92-o2  Bla-Mir-92-o2  Bta-Mir-92-P2a  Cel-Mir-92  Cfa-Mir-92-P2a  Cli-Mir-92-P2a  Cmi-Mir-92-P2a  Cpi-Mir-92-P2a  Cpo-Mir-92-P2a  Dno-Mir-92-P2a  Esc-Mir-92  Ete-Mir-92-P2a  Gga-Mir-92-P2a  Gja-Mir-92-P2a  Hsa-Mir-92-P2a  Isc-Mir-92  Mdo-Mir-92-P2a  Mml-Mir-92-P2a  Mun-Mir-92-P2a  Oan-Mir-92-P2a  Obi-Mir-92  Ocu-Mir-92-P2a  Rno-Mir-92-P2a  Sha-Mir-92-P2a  Sme-Mir-92  Spt-Mir-92-P2a  Sto-Mir-92-P2a  Tgu-Mir-92-P2a  Xla-Mir-92-P2a  Xtr-Mir-92-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(mm10)
chr3: 127545741-127545800 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-92-P2a)
Mir-430-P1 chr3: 127545238-127545297 [+] UCSC Ensembl
Mir-430-P2 chr3: 127545368-127545427 [+] UCSC Ensembl
Mir-430-P3 chr3: 127545501-127545561 [+] UCSC Ensembl
Mir-430-P4 chr3: 127545629-127545687 [+] UCSC Ensembl
Mir-92-P2a chr3: 127545741-127545800 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGUGCUGCAUAUAGAUAGACCAAGGCCGUCACUGUUGCUAACAUGCAACUCUGUUGAAUAGAAAUUGGAAUUGCACUUUAGCAAUGGUGAUGGACCUGUGUCAGUGGCCACUUACUUGGA
Get precursor sequence
Structure
        10         20         30        40        50         
UGUGCUGCAUAUAGAUA-   CA   -|               CA     C   GUUGAA 
                  GAC  AGG CCGUCACUGUUGCUAA  UGCAA UCU      U
                  CUG  UCC GGUAGUGGUAACGAUU  ACGUU AGG      A
AGGUUCAUUCACCGGUGA   UG   A^               UC     A   UUAAAG 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Star sequence

Mmu-Mir-92-P2a_5p*

mirBase accessionMIMAT0017214
Sequence
0- ACUGUUGCUAACAUGCAACUCU -22
Get sequence
Proposed targets TargetScanVert: mmu-miR-367-5p
miRDB: MIMAT0017214
Mature sequence

Mmu-Mir-92-P2a_3p

mirBase accessionMIMAT0003181
Sequence
38- AAUUGCACUUUAGCAAUGGUGA -60
Get sequence
Proposed targets microrna.org: MIMAT0003181
TargetScanVert: mmu-miR-367-3p
miRDB: MIMAT0003181